Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
PAAD rs1316471 chr7:51542081 C/T 0 178 15.77 13.1 1.03 KM Plot
PAAD rs13191362 chr6:163033350 A/G 0.000142 178 15.57 14.33 6.03 KM Plot
PAAD rs13252399 chr8:1815012 A/T 7.2E-6 178 16.92 13.03 6.02 KM Plot
PAAD rs13267804 chr8:1813692 C/T 5.62E-6 174 16.6 12.7 6.02 KM Plot
PAAD rs13272734 chr8:1817756 C/G 4.0E-5 173 16.17 13.03 6.02 KM Plot
PAAD rs13277172 chr8:1821137 T/G 3.26E-5 175 16.27 13.13 6.02 KM Plot
PAAD rs13281104 chr8:1811923 A/G 1.27E-6 170 17.23 12.7 6.02 KM Plot
PAAD rs13296785 chr9:37258316 A/G 6.52E-5 178 3.9 15.67 15.38 KM Plot
PAAD rs13355233 chr5:127425350 A/G 0.000152 178 7.87 13.95 16.17 KM Plot
PAAD rs13386645 chr2:240848546 C/G 4.04E-6 175 15.77 14.48 4.47 KM Plot
PAAD rs13392238 chr2:217895082 C/T 0.000141 178 16.07 14.47 7.2 KM Plot
PAAD rs13394296 chr2:70429234 T/C 0 178 15.37 17.4 1.03 KM Plot
PAAD rs13400654 chr2:240848547 A/G 4.04E-6 175 15.77 14.48 4.47 KM Plot
PAAD rs13402257 chr2:240846539 G/A 9.52E-6 171 15.67 14.18 4.47 KM Plot
PAAD rs13403416 chr2:70429052 A/G 0 178 15.37 17.4 1.03 KM Plot